ModestR manuals

ModestR user´s manual

User's Manual for ModestR v5.5 (16Mb) (Update 06/02/2019)

Step by Step Tutorial

ModestR Step by Step tutorials (Slideshare)

Num	Tutorial Link	Sample files
1	How to create a ModestR Database	Ipez for Tutorial 1 * CSV in Spanish Format * CSV in English Format
2	How to create and edit a map downloading data from GBIF
3	How to integrate and use environmental data in ModestR
4	Data cleaning, EOO (convex hull, alpha shape, kernel density) and niche of occurrence in ModestR
5	Doing a multiple distributions map and calculating spatial overlapping in MRMapping
6	Creating environmental layers in ModestR
7	Using some ModestR tools to browse ITIS taxonomy database and check taxonomic data using GBIF
8	Working with shapes. Searching for species in any area. Assessing environmental conditions
9	Adding NOAA´s Word Ocean Atlas 2013 data to ModestR
10	Creating environmental layers 3D
11	Calculating species distribution for different periods with ModestR
12	Recommendations for marine environments with ModestR and EEZ
13	Working with marine environmental variables, CMEMS and reprojections with ModestR
14	Adding WorldClim environmental data in ModestR
15	Locating species occupied river basins with ModestR
16	Importing different climatic change scenarios from WorldClim to ModestR
17	An example using ModestR to assess species distribution in different climatic change scenarios	VirtualSpecies Original for Tutorial 17 * CSV in Spanish Format * CSV in English Format
18	Estimating species composition in one or more regions with KnowBR and ModestR	Data for Tutorial 18 * ZIP Format
19	Calculating 3D species distribution in marine habitats with ModestR	Single Virtual Species Occurrences for Tutorial 19 * CSV in Spanish Format * CSV in English Format
20	Calculating most probable distribution of a species with Niche of Occurrence (NOO) in ModestR	Single Virtual Species Occurrences for Tutorial 20 * CSV in Spanish Format * CSV in English Format VirtualSpecies for tutorial 20 * MODESTRDB Format
21	Creating virtual species and calculating simple ensemble models with R (that can be later used with Version ModestR 5.6 or higher)	Data for Tutorial 21 * ZIP Format
22	Using Maxent in ModestR (Version ModestR 6.0 or higher)
23	Importing WOA18 data from WOA website directly to ModestR
24	Creating virtual species with ModestR
25	Phylogenetics trees with ModestR and BOLD	Database for tutorial 25 * MODESTRDB Format